After you witnessed TOM 1 getting killed by the Intruder, you and TOM's AI assistant, SARA built TOM a new body and you both installed TOM's robot shell inside his new robot body known as TOM 2 and TOM was inside of a tube SARA:TOM?! TOM?! Can you hear me?! TOM:Ok this is officially making me crazy!! TOM kicks the tube door and walks out of it TOM:Woah! What's going on?! SARA: you were destroyed. TOM: What?! I got destroyed?!